WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45D3.5.1 Sequence Name  F45D3.5.1
Length (nt)  2384   Chromosome Location  V: 12560732-12563383
Chromosome . Primary Identifier  V Chromosome Location . Start  12560732
Chromosome Location . End  12563383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45D3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004759 sel-1 F45D3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45D3.5 F45D3.5 2058   V: 12560733-12560853

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45D3.5.1 12560732 12563383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201998   122   V: 12560732-12560853 Caenorhabditis elegans
Exon201999   148   V: 12560896-12561043 Caenorhabditis elegans
Exon202000   361   V: 12561087-12561447 Caenorhabditis elegans
Exon202001   601   V: 12561521-12562121 Caenorhabditis elegans
Exon202002   411   V: 12562182-12562592 Caenorhabditis elegans
Exon202003   741   V: 12562643-12563383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45D3.5.1 12560732 12563383 1

1 Sequence

Length
2384

1 Sequence Ontology Term

Identifier Name Description
transcript