WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H9.3.1 Sequence Name  F56H9.3.1
Length (nt)  1295   Chromosome Location  V: 12638666-12640484
Chromosome . Primary Identifier  V Chromosome Location . Start  12638666
Chromosome Location . End  12640484 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001670 gpa-8 F56H9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H9.3 F56H9.3 1095   V: 12638852-12638917

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H9.3.1 12638666 12640484 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202225   252   V: 12638666-12638917 Caenorhabditis elegans
Exon202226   122   V: 12638981-12639102 Caenorhabditis elegans
Exon202227   154   V: 12639193-12639346 Caenorhabditis elegans
Exon202228   130   V: 12639394-12639523 Caenorhabditis elegans
Exon202229   129   V: 12639591-12639719 Caenorhabditis elegans
Exon202230   173   V: 12639769-12639941 Caenorhabditis elegans
Exon202231   142   V: 12639988-12640129 Caenorhabditis elegans
Exon202232   43   V: 12640199-12640241 Caenorhabditis elegans
Exon202233   76   V: 12640289-12640364 Caenorhabditis elegans
Exon202234   74   V: 12640411-12640484 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H9.3.1 12638666 12640484 -1

1 Sequence

Length
1295

1 Sequence Ontology Term

Identifier Name Description
transcript