WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H9.5.1 Sequence Name  F56H9.5.1
Length (nt)  3543   Chromosome Location  V: 12649925-12658714
Chromosome . Primary Identifier  V Chromosome Location . Start  12649925
Chromosome Location . End  12658714 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003011 lin-25 F56H9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H9.5 F56H9.5 3420   V: 12649957-12649989

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H9.5.1 12649925 12658714 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202276   65   V: 12649925-12649989 Caenorhabditis elegans
Exon202277   115   V: 12650060-12650174 Caenorhabditis elegans
Exon202278   83   V: 12650222-12650304 Caenorhabditis elegans
Exon202279   110   V: 12650352-12650461 Caenorhabditis elegans
Exon202280   88   V: 12650512-12650599 Caenorhabditis elegans
Exon202281   657   V: 12653576-12654232 Caenorhabditis elegans
Exon202282   477   V: 12654284-12654760 Caenorhabditis elegans
Exon202283   771   V: 12654821-12655591 Caenorhabditis elegans
Exon202284   297   V: 12655640-12655936 Caenorhabditis elegans
Exon202285   126   V: 12655987-12656112 Caenorhabditis elegans
Exon202286   219   V: 12656164-12656382 Caenorhabditis elegans
Exon202287   190   V: 12656429-12656618 Caenorhabditis elegans
Exon202290   345   V: 12658370-12658714 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H9.5.1 12649925 12658714 1

1 Sequence

Length
3543

1 Sequence Ontology Term

Identifier Name Description
transcript