WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11D1.12a.1 Sequence Name  R11D1.12a.1
Length (nt)  398   Chromosome Location  V: 12724558-12725993
Chromosome . Primary Identifier  V Chromosome Location . Start  12724558
Chromosome Location . End  12725993 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11D1.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045336 R11D1.12 R11D1.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11D1.12a R11D1.12a 225   V: 12724664-12724776

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.12a.1 12724558 12725993 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202421   219   V: 12724558-12724776 Caenorhabditis elegans
Exon202423   94   V: 12724872-12724965 Caenorhabditis elegans
Exon202424   85   V: 12725909-12725993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.12a.1 12724558 12725993 -1

1 Sequence

Length
398

1 Sequence Ontology Term

Identifier Name Description
transcript