WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:R11D1.8.2 Sequence Name  R11D1.8.2
Length (nt)  450   Chromosome Location  V: 12727593-12728112
Chromosome . Primary Identifier  V Chromosome Location . Start  12727593
Chromosome Location . End  12728112 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11D1.8.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004442 rpl-28 R11D1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11D1.8 R11D1.8 381   V: 12727681-12727859

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.8.2 12727593 12728112 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202428   17   V: 12727593-12727609 Caenorhabditis elegans
Exon202429   226   V: 12727634-12727859 Caenorhabditis elegans
Exon202432   207   V: 12727906-12728112 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.8.2 12727593 12728112 -1

1 Sequence

Length
450

1 Sequence Ontology Term

Identifier Name Description
transcript