WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11D1.9.1 Sequence Name  R11D1.9.1
Length (nt)  653   Chromosome Location  V: 12728631-12729417
Chromosome . Primary Identifier  V Chromosome Location . Start  12728631
Chromosome Location . End  12729417 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11D1.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011247 mrpl-49 R11D1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11D1.9 R11D1.9 564   V: 12728631-12728757

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.9.1 12728631 12729417 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202433   127   V: 12728631-12728757 Caenorhabditis elegans
Exon202434   135   V: 12728802-12728936 Caenorhabditis elegans
Exon202435   155   V: 12728978-12729132 Caenorhabditis elegans
Exon202436   236   V: 12729182-12729417 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.9.1 12728631 12729417 1

1 Sequence

Length
653

1 Sequence Ontology Term

Identifier Name Description
transcript