WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11D1.10a.1 Sequence Name  R11D1.10a.1
Length (nt)  1257   Chromosome Location  V: 12729520-12731794
Chromosome . Primary Identifier  V Chromosome Location . Start  12729520
Chromosome Location . End  12731794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11D1.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011248 zfyv-19 R11D1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11D1.10a R11D1.10a 1185   V: 12729521-12729580

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.10a.1 12729520 12731794 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202437   61   V: 12729520-12729580 Caenorhabditis elegans
Exon202439   147   V: 12729625-12729771 Caenorhabditis elegans
Exon202441   177   V: 12729829-12730005 Caenorhabditis elegans
Exon202444   153   V: 12730052-12730204 Caenorhabditis elegans
Exon202445   269   V: 12730600-12730868 Caenorhabditis elegans
Exon202448   89   V: 12731249-12731337 Caenorhabditis elegans
Exon202450   361   V: 12731434-12731794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.10a.1 12729520 12731794 1

1 Sequence

Length
1257

1 Sequence Ontology Term

Identifier Name Description
transcript