WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11D1.11.1 Sequence Name  R11D1.11.1
Length (nt)  905   Chromosome Location  V: 12731767-12733645
Chromosome . Primary Identifier  V Chromosome Location . Start  12731767
Chromosome Location . End  12733645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11D1.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000984 dhs-21 R11D1.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11D1.11 R11D1.11 756   V: 12731832-12731999

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.11.1 12731767 12733645 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202451   233   V: 12731767-12731999 Caenorhabditis elegans
Exon202452   119   V: 12732045-12732163 Caenorhabditis elegans
Exon202453   301   V: 12732209-12732509 Caenorhabditis elegans
Exon202454   110   V: 12732561-12732670 Caenorhabditis elegans
Exon202455   142   V: 12733504-12733645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11D1.11.1 12731767 12733645 -1

1 Sequence

Length
905

1 Sequence Ontology Term

Identifier Name Description
transcript