WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC455.6a.1 Sequence Name  ZC455.6a.1
Length (nt)  1679   Chromosome Location  V: 12790677-12792960
Chromosome . Primary Identifier  V Chromosome Location . Start  12790677
Chromosome Location . End  12792960 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC455.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013906 ugt-5 ZC455.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC455.6a ZC455.6a 1605   V: 12790714-12790987

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC455.6a.1 12790677 12792960 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202706   311   V: 12790677-12790987 Caenorhabditis elegans
Exon202709   137   V: 12791042-12791178 Caenorhabditis elegans
Exon202713   86   V: 12791229-12791314 Caenorhabditis elegans
Exon202715   235   V: 12791359-12791593 Caenorhabditis elegans
Exon202718   290   V: 12791641-12791930 Caenorhabditis elegans
Exon202722   111   V: 12791988-12792098 Caenorhabditis elegans
Exon202726   90   V: 12792147-12792236 Caenorhabditis elegans
Exon202733   226   V: 12792289-12792514 Caenorhabditis elegans
Exon202734   193   V: 12792768-12792960 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC455.6a.1 12790677 12792960 -1

1 Sequence

Length
1679

1 Sequence Ontology Term

Identifier Name Description
transcript