WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44H9.6.1 Sequence Name  C44H9.6.1
Length (nt)  2112   Chromosome Location  V: 12842490-12845330
Chromosome . Primary Identifier  V Chromosome Location . Start  12842490
Chromosome Location . End  12845330 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44H9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008101 C44H9.6 C44H9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H9.6 C44H9.6 1791   V: 12842566-12843132

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44H9.6.1 12842490 12845330 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202844   643   V: 12842490-12843132 Caenorhabditis elegans
Exon202845   287   V: 12843183-12843469 Caenorhabditis elegans
Exon202848   132   V: 12843520-12843651 Caenorhabditis elegans
Exon202851   94   V: 12843694-12843787 Caenorhabditis elegans
Exon202854   92   V: 12843837-12843928 Caenorhabditis elegans
Exon202857   135   V: 12843977-12844111 Caenorhabditis elegans
Exon202860   310   V: 12844160-12844469 Caenorhabditis elegans
Exon202863   143   V: 12844514-12844656 Caenorhabditis elegans
Exon202866   61   V: 12844775-12844835 Caenorhabditis elegans
Exon202869   120   V: 12844888-12845007 Caenorhabditis elegans
Exon202870   95   V: 12845236-12845330 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44H9.6.1 12842490 12845330 -1

1 Sequence

Length
2112

1 Sequence Ontology Term

Identifier Name Description
transcript