WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44H9.5a.1 Sequence Name  C44H9.5a.1
Length (nt)  2553   Chromosome Location  V: 12846091-12849864
Chromosome . Primary Identifier  V Chromosome Location . Start  12846091
Chromosome Location . End  12849864 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44H9.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008100 C44H9.5 C44H9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H9.5a C44H9.5a 1659   V: 12846919-12847152

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44H9.5a.1 12846091 12849864 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202872   1062   V: 12846091-12847152 Caenorhabditis elegans
Exon202875   305   V: 12847198-12847502 Caenorhabditis elegans
Exon202876   102   V: 12847555-12847656 Caenorhabditis elegans
Exon202878   84   V: 12847701-12847784 Caenorhabditis elegans
Exon202880   115   V: 12848087-12848201 Caenorhabditis elegans
Exon202882   95   V: 12848277-12848371 Caenorhabditis elegans
Exon202884   126   V: 12848423-12848548 Caenorhabditis elegans
Exon202886   94   V: 12848884-12848977 Caenorhabditis elegans
Exon202888   449   V: 12849024-12849472 Caenorhabditis elegans
Exon202890   121   V: 12849744-12849864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44H9.5a.1 12846091 12849864 -1

1 Sequence

Length
2553

1 Sequence Ontology Term

Identifier Name Description
transcript