WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44H9.5b.1 Sequence Name  C44H9.5b.1
Length (nt)  2536   Chromosome Location  V: 12846099-12849864
Chromosome . Primary Identifier  V Chromosome Location . Start  12846099
Chromosome Location . End  12849864 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44H9.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008100 C44H9.5 C44H9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H9.5b C44H9.5b 1650   V: 12846919-12847152

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44H9.5b.1 12846099 12849864 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202873   1054   V: 12846099-12847152 Caenorhabditis elegans
Exon202874   296   V: 12847198-12847493 Caenorhabditis elegans
Exon202877   102   V: 12847555-12847656 Caenorhabditis elegans
Exon202879   84   V: 12847701-12847784 Caenorhabditis elegans
Exon202881   115   V: 12848087-12848201 Caenorhabditis elegans
Exon202883   95   V: 12848277-12848371 Caenorhabditis elegans
Exon202885   126   V: 12848423-12848548 Caenorhabditis elegans
Exon202887   94   V: 12848884-12848977 Caenorhabditis elegans
Exon202889   449   V: 12849024-12849472 Caenorhabditis elegans
Exon202891   121   V: 12849744-12849864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44H9.5b.1 12846099 12849864 -1

1 Sequence

Length
2536

1 Sequence Ontology Term

Identifier Name Description
transcript