WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07F10.6.1 Sequence Name  T07F10.6.1
Length (nt)  930   Chromosome Location  V: 12863761-12868097
Chromosome . Primary Identifier  V Chromosome Location . Start  12863761
Chromosome Location . End  12868097 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07F10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011592 nspg-1 T07F10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07F10.6 T07F10.6 696   V: 12863786-12863928

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07F10.6.1 12863761 12868097 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202929   168   V: 12863761-12863928 Caenorhabditis elegans
Exon202930   80   V: 12863973-12864052 Caenorhabditis elegans
Exon202934   192   V: 12866866-12867057 Caenorhabditis elegans
Exon202935   84   V: 12867106-12867189 Caenorhabditis elegans
Exon202936   125   V: 12867244-12867368 Caenorhabditis elegans
Exon202937   281   V: 12867817-12868097 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07F10.6.1 12863761 12868097 -1

1 Sequence

Length
930

1 Sequence Ontology Term

Identifier Name Description
transcript