WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07F10.1b.1 Sequence Name  T07F10.1b.1
Length (nt)  3234   Chromosome Location  V: 12859534-12863829
Chromosome . Primary Identifier  V Chromosome Location . Start  12859534
Chromosome Location . End  12863829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07F10.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011587 anp-1 T07F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07F10.1b T07F10.1b 2931   V: 12859534-12859679

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07F10.1b.1 12859534 12863829 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202958   146   V: 12859534-12859679 Caenorhabditis elegans
Exon202960   178   V: 12859938-12860115 Caenorhabditis elegans
Exon202962   213   V: 12860312-12860524 Caenorhabditis elegans
Exon202964   354   V: 12860577-12860930 Caenorhabditis elegans
Exon202966   185   V: 12860977-12861161 Caenorhabditis elegans
Exon202968   208   V: 12861330-12861537 Caenorhabditis elegans
Exon202970   467   V: 12861591-12862057 Caenorhabditis elegans
Exon202972   202   V: 12862117-12862318 Caenorhabditis elegans
Exon202974   299   V: 12862365-12862663 Caenorhabditis elegans
Exon202976   135   V: 12862711-12862845 Caenorhabditis elegans
Exon202978   168   V: 12862891-12863058 Caenorhabditis elegans
Exon202980   147   V: 12863104-12863250 Caenorhabditis elegans
Exon202981   532   V: 12863298-12863829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07F10.1b.1 12859534 12863829 1

1 Sequence

Length
3234

1 Sequence Ontology Term

Identifier Name Description
transcript