WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R90.3.1 Sequence Name  R90.3.1
Length (nt)  553   Chromosome Location  V: 12904213-12905174
Chromosome . Primary Identifier  V Chromosome Location . Start  12904213
Chromosome Location . End  12905174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R90.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011285 ttr-28 R90.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R90.3 R90.3 450   V: 12904310-12904447

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R90.3.1 12904213 12905174 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203006   235   V: 12904213-12904447 Caenorhabditis elegans
Exon203007   128   V: 12904508-12904635 Caenorhabditis elegans
Exon203008   190   V: 12904985-12905174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R90.3.1 12904213 12905174 -1

1 Sequence

Length
553

1 Sequence Ontology Term

Identifier Name Description
transcript