WormMine: MRNA Transcript:F54F3.1a.1

• WormMine ID: Transcript:F54F3.1a.1
• Sequence Name: F54F3.1a.1
• Length (nt): 4997
• Chromosome Location: V: 12910113-12917198
• Chromosome . Primary Identifier: V
• Chromosome Location . Start: 12910113
• Chromosome Location . End: 12917198
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: F54F3.1a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00003738	nid-1	F54F3.1	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:F54F3.1a	F54F3.1a	4755	V: 12910118-12910222

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: Transcript:F54F3.1a.1
• Start: 12910113
• End: 12917198
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

16 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon203068			110	V: 12910113-12910222	Caenorhabditis elegans
Exon203069			366	V: 12910652-12911017	Caenorhabditis elegans
Exon203072			167	V: 12911073-12911239	Caenorhabditis elegans
Exon203075			131	V: 12911287-12911417	Caenorhabditis elegans
Exon203078			300	V: 12911463-12911762	Caenorhabditis elegans
Exon203081			251	V: 12911854-12912104	Caenorhabditis elegans
Exon203084			313	V: 12912217-12912529	Caenorhabditis elegans
Exon203087			929	V: 12912839-12913767	Caenorhabditis elegans
Exon203090			124	V: 12913823-12913946	Caenorhabditis elegans
Exon203093			144	V: 12913992-12914135	Caenorhabditis elegans
Exon203096			171	V: 12914221-12914391	Caenorhabditis elegans
Exon203097			97	V: 12914441-12914537	Caenorhabditis elegans
Exon203099			497	V: 12914770-12915266	Caenorhabditis elegans
Exon203101			243	V: 12915313-12915555	Caenorhabditis elegans
Exon203103			691	V: 12915816-12916506	Caenorhabditis elegans
Exon203107			463	V: 12916736-12917198	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:F54F3.1a.1
• Start: 12910113
• End: 12917198
• Strand: 1

1 Sequence

• Length: 4997

1 Sequence Ontology Term

• Name: transcript