WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54F3.4.1 Sequence Name  F54F3.4.1
Length (nt)  837   Chromosome Location  V: 12922608-12924156
Chromosome . Primary Identifier  V Chromosome Location . Start  12922608
Chromosome Location . End  12924156 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010063 dhrs-4 F54F3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F3.4 F54F3.4 783   V: 12922621-12922682

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F3.4.1 12922608 12924156 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203121   75   V: 12922608-12922682 Caenorhabditis elegans
Exon203122   181   V: 12922896-12923076 Caenorhabditis elegans
Exon203123   360   V: 12923136-12923495 Caenorhabditis elegans
Exon203124   221   V: 12923936-12924156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F3.4.1 12922608 12924156 1

1 Sequence

Length
837

1 Sequence Ontology Term

Identifier Name Description
transcript