WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T16G1.9 Sequence Name  T16G1.9
Length (nt)  2838   Chromosome Location  V: 12947095-12947242
Chromosome . Primary Identifier  V Chromosome Location . Start  12947095
Chromosome Location . End  12947242
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16G1.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20079 T16G1.9 105.0 945 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000592
WBRNAi00053419
WBRNAi00018775
WBRNAi00035616
WBRNAi00108529

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T16G1.9 12947095 12947242 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011802 T16G1.9 T16G1.9 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T16G1.9 12947095 12947242 -1
CDS:T16G1.9 12947299 12947817 -1
CDS:T16G1.9 12947865 12948303 -1
CDS:T16G1.9 12948349 12948496 -1
CDS:T16G1.9 12948548 12948697 -1
CDS:T16G1.9 12948746 12949176 -1
CDS:T16G1.9 12949228 12949907 -1
CDS:T16G1.9 12950245 12950395 -1
CDS:T16G1.9 12950440 12950520 -1
CDS:T16G1.9 12950566 12950656 -1

1 Sequence

Length
2838

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T16G1.9.1 T16G1.9.1 3275   V: 12946798-12950862
Transcript:T16G1.9.2 T16G1.9.2 3221   V: 12946798-12950742