WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15B9.5a.1 Sequence Name  F15B9.5a.1
Length (nt)  1110   Chromosome Location  V: 13010275-13013258
Chromosome . Primary Identifier  V Chromosome Location . Start  13010275
Chromosome Location . End  13013258 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15B9.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008849 try-10 F15B9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15B9.5a F15B9.5a 1068   V: 13010317-13010526

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15B9.5a.1 13010275 13013258 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203310   252   V: 13010275-13010526 Caenorhabditis elegans
Exon203314   51   V: 13011392-13011442 Caenorhabditis elegans
Exon203319   116   V: 13011496-13011611 Caenorhabditis elegans
Exon203321   82   V: 13011659-13011740 Caenorhabditis elegans
Exon203323   117   V: 13011789-13011905 Caenorhabditis elegans
Exon203325   112   V: 13012365-13012476 Caenorhabditis elegans
Exon203327   127   V: 13012522-13012648 Caenorhabditis elegans
Exon203330   239   V: 13012697-13012935 Caenorhabditis elegans
Exon203331   14   V: 13013245-13013258 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15B9.5a.1 13010275 13013258 -1

1 Sequence

Length
1110

1 Sequence Ontology Term

Identifier Name Description
transcript