WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34B4.1a.2 Sequence Name  C34B4.1a.2
Length (nt)  3661   Chromosome Location  V: 13098903-13120220
Chromosome . Primary Identifier  V Chromosome Location . Start  13098903
Chromosome Location . End  13120220 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34B4.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003143 max-1 C34B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34B4.1a C34B4.1a 2988   V: 13099122-13099346

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34B4.1a.2 13098903 13120220 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203559   444   V: 13098903-13099346 Caenorhabditis elegans
Exon203564   199   V: 13099397-13099595 Caenorhabditis elegans
Exon203568   687   V: 13099829-13100515 Caenorhabditis elegans
Exon203572   379   V: 13100727-13101105 Caenorhabditis elegans
Exon203576   459   V: 13101154-13101612 Caenorhabditis elegans
Exon203580   193   V: 13101833-13102025 Caenorhabditis elegans
Exon203584   687   V: 13102070-13102756 Caenorhabditis elegans
Exon203588   110   V: 13102914-13103023 Caenorhabditis elegans
Exon203592   130   V: 13103087-13103216 Caenorhabditis elegans
Exon203596   129   V: 13103549-13103677 Caenorhabditis elegans
Exon203604   104   V: 13110234-13110337 Caenorhabditis elegans
Exon203614   140   V: 13120081-13120220 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34B4.1a.2 13098903 13120220 -1

1 Sequence

Length
3661

1 Sequence Ontology Term

Identifier Name Description
transcript