WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34B4.1a.1 Sequence Name  C34B4.1a.1
Length (nt)  3510   Chromosome Location  V: 13098914-13110337
Chromosome . Primary Identifier  V Chromosome Location . Start  13098914
Chromosome Location . End  13110337 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34B4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003143 max-1 C34B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34B4.1a C34B4.1a 2988   V: 13099122-13099346

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34B4.1a.1 13098914 13110337 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203561   433   V: 13098914-13099346 Caenorhabditis elegans
Exon203563   199   V: 13099397-13099595 Caenorhabditis elegans
Exon203567   687   V: 13099829-13100515 Caenorhabditis elegans
Exon203571   379   V: 13100727-13101105 Caenorhabditis elegans
Exon203575   459   V: 13101154-13101612 Caenorhabditis elegans
Exon203579   193   V: 13101833-13102025 Caenorhabditis elegans
Exon203583   687   V: 13102070-13102756 Caenorhabditis elegans
Exon203587   110   V: 13102914-13103023 Caenorhabditis elegans
Exon203591   130   V: 13103087-13103216 Caenorhabditis elegans
Exon203595   129   V: 13103549-13103677 Caenorhabditis elegans
Exon203603   104   V: 13110234-13110337 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34B4.1a.1 13098914 13110337 -1

1 Sequence

Length
3510

1 Sequence Ontology Term

Identifier Name Description
transcript