WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E8.1i.1 Sequence Name  T09E8.1i.1
Length (nt)  795   Chromosome Location  V: 13152920-13154024
Chromosome . Primary Identifier  V Chromosome Location . Start  13152920
Chromosome Location . End  13154024 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E8.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011647 noca-1 T09E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E8.1i T09E8.1i 795   V: 13152920-13153087

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1i.1 13152920 13154024 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203686   168   V: 13152920-13153087 Caenorhabditis elegans
Exon203689   139   V: 13153132-13153270 Caenorhabditis elegans
Exon203691   176   V: 13153313-13153488 Caenorhabditis elegans
Exon203693   81   V: 13153620-13153700 Caenorhabditis elegans
Exon203695   98   V: 13153749-13153846 Caenorhabditis elegans
Exon203697   133   V: 13153892-13154024 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1i.1 13152920 13154024 1

1 Sequence

Length
795

1 Sequence Ontology Term

Identifier Name Description
transcript