WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E8.1h.1 Sequence Name  T09E8.1h.1
Length (nt)  3183   Chromosome Location  V: 13152919-13175996
Chromosome . Primary Identifier  V Chromosome Location . Start  13152919
Chromosome Location . End  13175996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E8.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011647 noca-1 T09E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E8.1h T09E8.1h 2769   V: 13152920-13153087

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1h.1 13152919 13175996 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203739   169   V: 13152919-13153087 Caenorhabditis elegans
Exon203742   139   V: 13153132-13153270 Caenorhabditis elegans
Exon203744   176   V: 13153313-13153488 Caenorhabditis elegans
Exon203746   81   V: 13153620-13153700 Caenorhabditis elegans
Exon203748   98   V: 13153749-13153846 Caenorhabditis elegans
Exon203750   89   V: 13153892-13153980 Caenorhabditis elegans
Exon203769   146   V: 13162315-13162460 Caenorhabditis elegans
Exon203774   211   V: 13163498-13163708 Caenorhabditis elegans
Exon203780   172   V: 13164297-13164468 Caenorhabditis elegans
Exon203790   88   V: 13167637-13167724 Caenorhabditis elegans
Exon203800   154   V: 13173130-13173283 Caenorhabditis elegans
Exon203808   120   V: 13173706-13173825 Caenorhabditis elegans
Exon203816   644   V: 13174046-13174689 Caenorhabditis elegans
Exon203824   351   V: 13175054-13175404 Caenorhabditis elegans
Exon203830   545   V: 13175452-13175996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1h.1 13152919 13175996 1

1 Sequence

Length
3183

1 Sequence Ontology Term

Identifier Name Description
transcript