WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E8.1b.1 Sequence Name  T09E8.1b.1
Length (nt)  2070   Chromosome Location  V: 13159728-13175583
Chromosome . Primary Identifier  V Chromosome Location . Start  13159728
Chromosome Location . End  13175583 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011647 noca-1 T09E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E8.1b T09E8.1b 2070   V: 13159728-13159779

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1b.1 13159728 13175583 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203705   52   V: 13159728-13159779 Caenorhabditis elegans
Exon203711   146   V: 13162315-13162460 Caenorhabditis elegans
Exon203717   211   V: 13163498-13163708 Caenorhabditis elegans
Exon203723   172   V: 13164297-13164468 Caenorhabditis elegans
Exon203731   88   V: 13167637-13167724 Caenorhabditis elegans
Exon203740   154   V: 13173130-13173283 Caenorhabditis elegans
Exon203748   120   V: 13173706-13173825 Caenorhabditis elegans
Exon203756   644   V: 13174046-13174689 Caenorhabditis elegans
Exon203764   351   V: 13175054-13175404 Caenorhabditis elegans
Exon203771   132   V: 13175452-13175583 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1b.1 13159728 13175583 1

1 Sequence

Length
2070

1 Sequence Ontology Term

Identifier Name Description
transcript