WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E8.1f.1 Sequence Name  T09E8.1f.1
Length (nt)  2076   Chromosome Location  V: 13156784-13175583
Chromosome . Primary Identifier  V Chromosome Location . Start  13156784
Chromosome Location . End  13175583 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E8.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011647 noca-1 T09E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E8.1f T09E8.1f 2076   V: 13156784-13156841

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1f.1 13156784 13175583 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203757   58   V: 13156784-13156841 Caenorhabditis elegans
Exon203767   146   V: 13162315-13162460 Caenorhabditis elegans
Exon203773   211   V: 13163498-13163708 Caenorhabditis elegans
Exon203779   172   V: 13164297-13164468 Caenorhabditis elegans
Exon203788   88   V: 13167637-13167724 Caenorhabditis elegans
Exon203798   154   V: 13173130-13173283 Caenorhabditis elegans
Exon203806   120   V: 13173706-13173825 Caenorhabditis elegans
Exon203814   644   V: 13174046-13174689 Caenorhabditis elegans
Exon203822   351   V: 13175054-13175404 Caenorhabditis elegans
Exon203829   132   V: 13175452-13175583 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1f.1 13156784 13175583 1

1 Sequence

Length
2076

1 Sequence Ontology Term

Identifier Name Description
transcript