WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E8.1a.1 Sequence Name  T09E8.1a.1
Length (nt)  3129   Chromosome Location  V: 13161401-13176115
Chromosome . Primary Identifier  V Chromosome Location . Start  13161401
Chromosome Location . End  13176115 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011647 noca-1 T09E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E8.1a T09E8.1a 2244   V: 13161754-13161979

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1a.1 13161401 13176115 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203761   579   V: 13161401-13161979 Caenorhabditis elegans
Exon203764   146   V: 13162315-13162460 Caenorhabditis elegans
Exon203770   211   V: 13163498-13163708 Caenorhabditis elegans
Exon203776   172   V: 13164297-13164468 Caenorhabditis elegans
Exon203784   88   V: 13167637-13167724 Caenorhabditis elegans
Exon203793   154   V: 13173130-13173283 Caenorhabditis elegans
Exon203801   120   V: 13173706-13173825 Caenorhabditis elegans
Exon203809   644   V: 13174046-13174689 Caenorhabditis elegans
Exon203817   351   V: 13175054-13175404 Caenorhabditis elegans
Exon203832   664   V: 13175452-13176115 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.1a.1 13161401 13176115 1

1 Sequence

Length
3129

1 Sequence Ontology Term

Identifier Name Description
transcript