WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T09E8.1g Sequence Name  T09E8.1g
Length (nt)  1788   Chromosome Location  V: 13164170-13164468
Chromosome . Primary Identifier  V Chromosome Location . Start  13164170
Chromosome Location . End  13164468
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E8.1g

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48378 NOCA-1, isoform g 67.4 595 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00085793
WBRNAi00086019
WBRNAi00052961
WBRNAi00052962
WBRNAi00000519
WBRNAi00018499
WBRNAi00071829
WBRNAi00069428
WBRNAi00062852
WBRNAi00035393
WBRNAi00071586
WBRNAi00065758
WBRNAi00086020

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T09E8.1g 13164170 13164468 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011647 noca-1 T09E8.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T09E8.1g 13164170 13164468 1
CDS:T09E8.1g 13167637 13167724 1
CDS:T09E8.1g 13173130 13173283 1
CDS:T09E8.1g 13173706 13173825 1
CDS:T09E8.1g 13174046 13174689 1
CDS:T09E8.1g 13175054 13175404 1
CDS:T09E8.1g 13175452 13175583 1

1 Sequence

Length
1788

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T09E8.1g.1 T09E8.1g.1 3174   V: 13153941-13176111