WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09E8.3.1 Sequence Name  T09E8.3.1
Length (nt)  603   Chromosome Location  V: 13180330-13181534
Chromosome . Primary Identifier  V Chromosome Location . Start  13180330
Chromosome Location . End  13181534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011648 cni-1 T09E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E8.3 T09E8.3 438   V: 13180333-13180413

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.3.1 13180330 13181534 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203788   84   V: 13180330-13180413 Caenorhabditis elegans
Exon203789   326   V: 13180968-13181293 Caenorhabditis elegans
Exon203790   193   V: 13181342-13181534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09E8.3.1 13180330 13181534 1

1 Sequence

Length
603

1 Sequence Ontology Term

Identifier Name Description
transcript