WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B1.4.2 Sequence Name  F57B1.4.2
Length (nt)  1070   Chromosome Location  V: 13200982-13202099
Chromosome . Primary Identifier  V Chromosome Location . Start  13200982
Chromosome Location . End  13202099 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B1.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000733 col-160 F57B1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B1.4 F57B1.4 954   V: 13201098-13201835

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B1.4.2 13200982 13202099 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203855   854   V: 13200982-13201835 Caenorhabditis elegans
Exon203858   216   V: 13201884-13202099 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B1.4.2 13200982 13202099 -1

1 Sequence

Length
1070

1 Sequence Ontology Term

Identifier Name Description
transcript