WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B1.6a.1 Sequence Name  F57B1.6a.1
Length (nt)  798   Chromosome Location  V: 13209645-13213462
Chromosome . Primary Identifier  V Chromosome Location . Start  13209645
Chromosome Location . End  13213462 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B1.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010189 F57B1.6 F57B1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B1.6a F57B1.6a 678   V: 13209645-13209726

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B1.6a.1 13209645 13213462 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203868   82   V: 13209645-13209726 Caenorhabditis elegans
Exon203870   53   V: 13212174-13212226 Caenorhabditis elegans
Exon203872   87   V: 13212488-13212574 Caenorhabditis elegans
Exon203874   150   V: 13212622-13212771 Caenorhabditis elegans
Exon203876   83   V: 13212823-13212905 Caenorhabditis elegans
Exon203879   343   V: 13213120-13213462 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B1.6a.1 13209645 13213462 1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
transcript