WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32F2.1c.1 Sequence Name  F32F2.1c.1
Length (nt)  2877   Chromosome Location  V: 13273590-13286075
Chromosome . Primary Identifier  V Chromosome Location . Start  13273590
Chromosome Location . End  13286075 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32F2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009337 uig-1 F32F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32F2.1c F32F2.1c 2877   V: 13273590-13273763

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F32F2.1c.1 13273590 13286075 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203933   174   V: 13273590-13273763 Caenorhabditis elegans
Exon203942   151   V: 13274327-13274477 Caenorhabditis elegans
Exon203951   71   V: 13274530-13274600 Caenorhabditis elegans
Exon203960   120   V: 13274649-13274768 Caenorhabditis elegans
Exon203970   99   V: 13275151-13275249 Caenorhabditis elegans
Exon203981   99   V: 13275298-13275396 Caenorhabditis elegans
Exon203989   117   V: 13275569-13275685 Caenorhabditis elegans
Exon203996   480   V: 13275877-13276356 Caenorhabditis elegans
Exon204006   159   V: 13276405-13276563 Caenorhabditis elegans
Exon204013   399   V: 13276668-13277066 Caenorhabditis elegans
Exon204020   423   V: 13277115-13277537 Caenorhabditis elegans
Exon204028   85   V: 13277671-13277755 Caenorhabditis elegans
Exon204035   75   V: 13282878-13282952 Caenorhabditis elegans
Exon204041   210   V: 13283003-13283212 Caenorhabditis elegans
Exon204046   151   V: 13283855-13284005 Caenorhabditis elegans
Exon204049   64   V: 13286012-13286075 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F32F2.1c.1 13273590 13286075 -1

1 Sequence

Length
2877

1 Sequence Ontology Term

Identifier Name Description
transcript