WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32F2.1a.2 Sequence Name  F32F2.1a.2
Length (nt)  3359   Chromosome Location  V: 13273157-13292399
Chromosome . Primary Identifier  V Chromosome Location . Start  13273157
Chromosome Location . End  13292399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32F2.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009337 uig-1 F32F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32F2.1a F32F2.1a 2760   V: 13273590-13273763

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F32F2.1a.2 13273157 13292399 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203982   607   V: 13273157-13273763 Caenorhabditis elegans
Exon203993   151   V: 13274327-13274477 Caenorhabditis elegans
Exon204002   71   V: 13274530-13274600 Caenorhabditis elegans
Exon204011   120   V: 13274649-13274768 Caenorhabditis elegans
Exon204021   99   V: 13275151-13275249 Caenorhabditis elegans
Exon204032   99   V: 13275298-13275396 Caenorhabditis elegans
Exon204040   117   V: 13275569-13275685 Caenorhabditis elegans
Exon204047   480   V: 13275877-13276356 Caenorhabditis elegans
Exon204057   159   V: 13276405-13276563 Caenorhabditis elegans
Exon204064   399   V: 13276668-13277066 Caenorhabditis elegans
Exon204071   423   V: 13277115-13277537 Caenorhabditis elegans
Exon204079   85   V: 13277671-13277755 Caenorhabditis elegans
Exon204086   75   V: 13282878-13282952 Caenorhabditis elegans
Exon204092   210   V: 13283003-13283212 Caenorhabditis elegans
Exon204098   151   V: 13283855-13284005 Caenorhabditis elegans
Exon204107   113   V: 13292287-13292399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F32F2.1a.2 13273157 13292399 -1

1 Sequence

Length
3359

1 Sequence Ontology Term

Identifier Name Description
transcript