WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32F2.1b.1 Sequence Name  F32F2.1b.1
Length (nt)  2919   Chromosome Location  V: 13273590-13292392
Chromosome . Primary Identifier  V Chromosome Location . Start  13273590
Chromosome Location . End  13292392 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32F2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009337 uig-1 F32F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32F2.1b F32F2.1b 2919   V: 13273590-13273763

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F32F2.1b.1 13273590 13292392 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203988   174   V: 13273590-13273763 Caenorhabditis elegans
Exon203995   151   V: 13274327-13274477 Caenorhabditis elegans
Exon204004   71   V: 13274530-13274600 Caenorhabditis elegans
Exon204013   120   V: 13274649-13274768 Caenorhabditis elegans
Exon204023   99   V: 13275151-13275249 Caenorhabditis elegans
Exon204034   99   V: 13275298-13275396 Caenorhabditis elegans
Exon204042   117   V: 13275569-13275685 Caenorhabditis elegans
Exon204049   480   V: 13275877-13276356 Caenorhabditis elegans
Exon204059   159   V: 13276405-13276563 Caenorhabditis elegans
Exon204066   399   V: 13276668-13277066 Caenorhabditis elegans
Exon204073   423   V: 13277115-13277537 Caenorhabditis elegans
Exon204081   85   V: 13277671-13277755 Caenorhabditis elegans
Exon204088   75   V: 13282878-13282952 Caenorhabditis elegans
Exon204094   210   V: 13283003-13283212 Caenorhabditis elegans
Exon204099   151   V: 13283855-13284005 Caenorhabditis elegans
Exon204106   106   V: 13292287-13292392 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F32F2.1b.1 13273590 13292392 -1

1 Sequence

Length
2919

1 Sequence Ontology Term

Identifier Name Description
transcript