WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50B6.6.1 Sequence Name  C50B6.6.1
Length (nt)  1138   Chromosome Location  V: 13320976-13322381
Chromosome . Primary Identifier  V Chromosome Location . Start  13320976
Chromosome Location . End  13322381 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50B6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005240 srh-15 C50B6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50B6.6 C50B6.6 1104   V: 13320984-13321057

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50B6.6.1 13320976 13322381 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204114   82   V: 13320976-13321057 Caenorhabditis elegans
Exon204115   126   V: 13321112-13321237 Caenorhabditis elegans
Exon204116   146   V: 13321287-13321432 Caenorhabditis elegans
Exon204117   197   V: 13321479-13321675 Caenorhabditis elegans
Exon204118   316   V: 13321730-13322045 Caenorhabditis elegans
Exon204119   271   V: 13322111-13322381 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50B6.6.1 13320976 13322381 1

1 Sequence

Length
1138

1 Sequence Ontology Term

Identifier Name Description
transcript