WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C50B6.8a Sequence Name  C50B6.8a
Length (nt)  1347   Chromosome Location  V: 13331230-13331489
Chromosome . Primary Identifier  V Chromosome Location . Start  13331230
Chromosome Location . End  13331489
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50B6.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40925 NHR-168, isoform a 51.2 448 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00042856
WBRNAi00012181

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C50B6.8a 13331230 13331489 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008221 nhr-168 C50B6.8 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C50B6.8a 13331230 13331489 -1
CDS:C50B6.8a 13331849 13331955 -1
CDS:C50B6.8a 13332004 13332305 -1
CDS:C50B6.8a 13332351 13332965 -1
CDS:C50B6.8a 13333324 13333386 -1

1 Sequence

Length
1347

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C50B6.8a.1 C50B6.8a.1 1785   V: 13331114-13333871
Transcript:C50B6.8a.2 C50B6.8a.2 1477   V: 13331114-13333400