WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04G12.2.1 Sequence Name  M04G12.2.1
Length (nt)  1564   Chromosome Location  V: 13381189-13383077
Chromosome . Primary Identifier  V Chromosome Location . Start  13381189
Chromosome Location . End  13383077 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04G12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000789 cpz-2 M04G12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04G12.2 M04G12.2 1404   V: 13381264-13381311

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04G12.2.1 13381189 13383077 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204347   123   V: 13381189-13381311 Caenorhabditis elegans
Exon204348   222   V: 13381363-13381584 Caenorhabditis elegans
Exon204349   219   V: 13381632-13381850 Caenorhabditis elegans
Exon204350   283   V: 13381895-13382177 Caenorhabditis elegans
Exon204351   192   V: 13382226-13382417 Caenorhabditis elegans
Exon204352   525   V: 13382553-13383077 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04G12.2.1 13381189 13383077 1

1 Sequence

Length
1564

1 Sequence Ontology Term

Identifier Name Description
transcript