WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04G12.3.1 Sequence Name  M04G12.3.1
Length (nt)  2214   Chromosome Location  V: 13383019-13385898
Chromosome . Primary Identifier  V Chromosome Location . Start  13383019
Chromosome Location . End  13385898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04G12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001554 gcy-34 M04G12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04G12.3 M04G12.3 2061   V: 13383122-13383249

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04G12.3.1 13383019 13385898 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204333   231   V: 13383019-13383249 Caenorhabditis elegans
Exon204334   731   V: 13383300-13384030 Caenorhabditis elegans
Exon204335   240   V: 13384087-13384326 Caenorhabditis elegans
Exon204336   198   V: 13384373-13384570 Caenorhabditis elegans
Exon204337   188   V: 13384618-13384805 Caenorhabditis elegans
Exon204338   398   V: 13384912-13385309 Caenorhabditis elegans
Exon204339   101   V: 13385357-13385457 Caenorhabditis elegans
Exon204340   74   V: 13385572-13385645 Caenorhabditis elegans
Exon204341   53   V: 13385846-13385898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04G12.3.1 13383019 13385898 -1

1 Sequence

Length
2214

1 Sequence Ontology Term

Identifier Name Description
transcript