WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F1.3.1 Sequence Name  F53F1.3.1
Length (nt)  905   Chromosome Location  V: 13408242-13409832
Chromosome . Primary Identifier  V Chromosome Location . Start  13408242
Chromosome Location . End  13409832 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009981 F53F1.3 F53F1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F1.3 F53F1.3 852   V: 13408242-13408415

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F1.3.1 13408242 13409832 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204376   174   V: 13408242-13408415 Caenorhabditis elegans
Exon204377   122   V: 13408463-13408584 Caenorhabditis elegans
Exon204378   190   V: 13408641-13408830 Caenorhabditis elegans
Exon204379   96   V: 13408881-13408976 Caenorhabditis elegans
Exon204380   90   V: 13409447-13409536 Caenorhabditis elegans
Exon204381   233   V: 13409600-13409832 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F1.3.1 13408242 13409832 1

1 Sequence

Length
905

1 Sequence Ontology Term

Identifier Name Description
transcript