WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53F1.6a Sequence Name  F53F1.6a
Length (nt)  819   Chromosome Location  V: 13416225-13416335
Chromosome . Primary Identifier  V Chromosome Location . Start  13416225
Chromosome Location . End  13416335
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F1.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10942 F53F1.6, isoform a 31.9 272 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048136
WBRNAi00015518
WBRNAi00032697

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53F1.6a 13416225 13416335 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009984 F53F1.6 F53F1.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53F1.6a 13416225 13416335 -1
CDS:F53F1.6a 13416403 13416627 -1
CDS:F53F1.6a 13416775 13416810 -1
CDS:F53F1.6a 13416859 13416940 -1
CDS:F53F1.6a 13416989 13417191 -1
CDS:F53F1.6a 13417250 13417354 -1
CDS:F53F1.6a 13417548 13417604 -1

1 Sequence

Length
819

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53F1.6a.1 F53F1.6a.1 944   V: 13416100-13417604