WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F1.11.1 Sequence Name  F53F1.11.1
Length (nt)  1020   Chromosome Location  V: 13427607-13428760
Chromosome . Primary Identifier  V Chromosome Location . Start  13427607
Chromosome Location . End  13428760 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F1.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005097 srd-19 F53F1.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F1.11 F53F1.11 1020   V: 13427607-13427857

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F1.11.1 13427607 13428760 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204425   251   V: 13427607-13427857 Caenorhabditis elegans
Exon204426   343   V: 13427903-13428245 Caenorhabditis elegans
Exon204427   241   V: 13428292-13428532 Caenorhabditis elegans
Exon204428   185   V: 13428576-13428760 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F1.11.1 13427607 13428760 -1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript