WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y2H9A.2.1 Sequence Name  Y2H9A.2.1
Length (nt)  1020   Chromosome Location  V: 13430651-13432714
Chromosome . Primary Identifier  V Chromosome Location . Start  13430651
Chromosome Location . End  13432714 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y2H9A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005095 srd-17 Y2H9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y2H9A.2 Y2H9A.2 1020   V: 13430651-13430901

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y2H9A.2.1 13430651 13432714 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204430   251   V: 13430651-13430901 Caenorhabditis elegans
Exon204431   343   V: 13430953-13431295 Caenorhabditis elegans
Exon204432   241   V: 13431576-13431816 Caenorhabditis elegans
Exon204433   185   V: 13432530-13432714 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y2H9A.2.1 13430651 13432714 -1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript