WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y2H9A.1.1 Sequence Name  Y2H9A.1.1
Length (nt)  3121   Chromosome Location  V: 13433050-13437545
Chromosome . Primary Identifier  V Chromosome Location . Start  13433050
Chromosome Location . End  13437545 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y2H9A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003222 mes-4 Y2H9A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y2H9A.1 Y2H9A.1 2697   V: 13433442-13433681

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y2H9A.1.1 13433050 13437545 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204434   632   V: 13433050-13433681 Caenorhabditis elegans
Exon204435   153   V: 13433734-13433886 Caenorhabditis elegans
Exon204436   132   V: 13434252-13434383 Caenorhabditis elegans
Exon204437   402   V: 13434437-13434838 Caenorhabditis elegans
Exon204438   351   V: 13435117-13435467 Caenorhabditis elegans
Exon204439   304   V: 13435898-13436201 Caenorhabditis elegans
Exon204440   575   V: 13436250-13436824 Caenorhabditis elegans
Exon204441   257   V: 13436874-13437130 Caenorhabditis elegans
Exon204442   267   V: 13437182-13437448 Caenorhabditis elegans
Exon204443   48   V: 13437498-13437545 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y2H9A.1.1 13433050 13437545 -1

1 Sequence

Length
3121

1 Sequence Ontology Term

Identifier Name Description
transcript