WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y2H9A.4a.1 Sequence Name  Y2H9A.4a.1
Length (nt)  1803   Chromosome Location  V: 13446017-13448815
Chromosome . Primary Identifier  V Chromosome Location . Start  13446017
Chromosome Location . End  13448815 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y2H9A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012381 Y2H9A.4 Y2H9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y2H9A.4a Y2H9A.4a 1803   V: 13446017-13446053

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y2H9A.4a.1 13446017 13448815 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204514   37   V: 13446017-13446053 Caenorhabditis elegans
Exon204520   104   V: 13446101-13446204 Caenorhabditis elegans
Exon204523   114   V: 13446251-13446364 Caenorhabditis elegans
Exon204530   308   V: 13446416-13446723 Caenorhabditis elegans
Exon204533   510   V: 13447097-13447606 Caenorhabditis elegans
Exon204538   130   V: 13447652-13447781 Caenorhabditis elegans
Exon204543   186   V: 13447839-13448024 Caenorhabditis elegans
Exon204548   45   V: 13448268-13448312 Caenorhabditis elegans
Exon204553   123   V: 13448358-13448480 Caenorhabditis elegans
Exon204558   63   V: 13448527-13448589 Caenorhabditis elegans
Exon204563   183   V: 13448633-13448815 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y2H9A.4a.1 13446017 13448815 1

1 Sequence

Length
1803

1 Sequence Ontology Term

Identifier Name Description
transcript