WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10G3.4b.1 Sequence Name  T10G3.4b.1
Length (nt)  1020   Chromosome Location  V: 13482031-13484439
Chromosome . Primary Identifier  V Chromosome Location . Start  13482031
Chromosome Location . End  13484439 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10G3.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011695 T10G3.4 T10G3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10G3.4b T10G3.4b 966   V: 13482075-13482155

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10G3.4b.1 13482031 13484439 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204587   125   V: 13482031-13482155 Caenorhabditis elegans
Exon204589   135   V: 13482635-13482769 Caenorhabditis elegans
Exon204591   148   V: 13482877-13483024 Caenorhabditis elegans
Exon204593   206   V: 13483071-13483276 Caenorhabditis elegans
Exon204595   101   V: 13483619-13483719 Caenorhabditis elegans
Exon204597   152   V: 13483763-13483914 Caenorhabditis elegans
Exon204599   153   V: 13484287-13484439 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10G3.4b.1 13482031 13484439 -1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript