WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10G3.3.1 Sequence Name  T10G3.3.1
Length (nt)  998   Chromosome Location  V: 13487026-13489626
Chromosome . Primary Identifier  V Chromosome Location . Start  13487026
Chromosome Location . End  13489626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10G3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011694 T10G3.3 T10G3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10G3.3 T10G3.3 894   V: 13487130-13487192

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10G3.3.1 13487026 13489626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204601   167   V: 13487026-13487192 Caenorhabditis elegans
Exon204602   124   V: 13487237-13487360 Caenorhabditis elegans
Exon204604   179   V: 13487406-13487584 Caenorhabditis elegans
Exon204606   82   V: 13488047-13488128 Caenorhabditis elegans
Exon204608   230   V: 13488180-13488409 Caenorhabditis elegans
Exon204610   129   V: 13488683-13488811 Caenorhabditis elegans
Exon204612   87   V: 13489540-13489626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10G3.3.1 13487026 13489626 -1

1 Sequence

Length
998

1 Sequence Ontology Term

Identifier Name Description
transcript