WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11G10.2.1 Sequence Name  R11G10.2.1
Length (nt)  1628   Chromosome Location  V: 13511905-13515215
Chromosome . Primary Identifier  V Chromosome Location . Start  13511905
Chromosome Location . End  13515215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011249 semi-1 R11G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11G10.2 R11G10.2 1521   V: 13511905-13511982

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11G10.2.1 13511905 13515215 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204660   78   V: 13511905-13511982 Caenorhabditis elegans
Exon204661   79   V: 13512668-13512746 Caenorhabditis elegans
Exon204662   227   V: 13512833-13513059 Caenorhabditis elegans
Exon204663   153   V: 13513250-13513402 Caenorhabditis elegans
Exon204664   242   V: 13513736-13513977 Caenorhabditis elegans
Exon204665   177   V: 13514042-13514218 Caenorhabditis elegans
Exon204666   124   V: 13514287-13514410 Caenorhabditis elegans
Exon204667   426   V: 13514459-13514884 Caenorhabditis elegans
Exon204668   122   V: 13515094-13515215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11G10.2.1 13511905 13515215 -1

1 Sequence

Length
1628

1 Sequence Ontology Term

Identifier Name Description
transcript