WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56A3.3d.1 Sequence Name  C56A3.3d.1
Length (nt)  1831   Chromosome Location  V: 13531666-13536105
Chromosome . Primary Identifier  V Chromosome Location . Start  13531666
Chromosome Location . End  13536105 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56A3.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008342 frpr-5 C56A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56A3.3d C56A3.3d 1470   V: 13532027-13532170

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56A3.3d.1 13531666 13536105 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204691   505   V: 13531666-13532170 Caenorhabditis elegans
Exon204696   116   V: 13532239-13532354 Caenorhabditis elegans
Exon204699   79   V: 13532475-13532553 Caenorhabditis elegans
Exon204702   121   V: 13532608-13532728 Caenorhabditis elegans
Exon204705   155   V: 13532777-13532931 Caenorhabditis elegans
Exon204708   184   V: 13532982-13533165 Caenorhabditis elegans
Exon204711   209   V: 13533499-13533707 Caenorhabditis elegans
Exon204714   319   V: 13533763-13534081 Caenorhabditis elegans
Exon204717   93   V: 13534524-13534616 Caenorhabditis elegans
Exon204719   50   V: 13536056-13536105 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56A3.3d.1 13531666 13536105 -1

1 Sequence

Length
1831

1 Sequence Ontology Term

Identifier Name Description
transcript