WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56A3.3b.1 Sequence Name  C56A3.3b.1
Length (nt)  1482   Chromosome Location  V: 13532027-13536105
Chromosome . Primary Identifier  V Chromosome Location . Start  13532027
Chromosome Location . End  13536105 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56A3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008342 frpr-5 C56A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56A3.3b C56A3.3b 1482   V: 13532027-13532182

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56A3.3b.1 13532027 13536105 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204693   156   V: 13532027-13532182 Caenorhabditis elegans
Exon204695   116   V: 13532239-13532354 Caenorhabditis elegans
Exon204698   79   V: 13532475-13532553 Caenorhabditis elegans
Exon204701   121   V: 13532608-13532728 Caenorhabditis elegans
Exon204704   155   V: 13532777-13532931 Caenorhabditis elegans
Exon204707   184   V: 13532982-13533165 Caenorhabditis elegans
Exon204710   209   V: 13533499-13533707 Caenorhabditis elegans
Exon204713   319   V: 13533763-13534081 Caenorhabditis elegans
Exon204716   93   V: 13534524-13534616 Caenorhabditis elegans
Exon204718   50   V: 13536056-13536105 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56A3.3b.1 13532027 13536105 -1

1 Sequence

Length
1482

1 Sequence Ontology Term

Identifier Name Description
transcript