WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C56A3.3d Sequence Name  C56A3.3d
Length (nt)  1470   Chromosome Location  V: 13532027-13532170
Chromosome . Primary Identifier  V Chromosome Location . Start  13532027
Chromosome Location . End  13532170
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56A3.3d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43071 FRPR-5, isoform d 55.7 489 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00043253
WBRNAi00012449
WBRNAi00030191

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C56A3.3d 13532027 13532170 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008342 frpr-5 C56A3.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C56A3.3d 13532027 13532170 -1
CDS:C56A3.3d 13532239 13532354 -1
CDS:C56A3.3d 13532475 13532553 -1
CDS:C56A3.3d 13532608 13532728 -1
CDS:C56A3.3d 13532777 13532931 -1
CDS:C56A3.3d 13532982 13533165 -1
CDS:C56A3.3d 13533499 13533707 -1
CDS:C56A3.3d 13533763 13534081 -1
CDS:C56A3.3d 13534524 13534616 -1
CDS:C56A3.3d 13536056 13536105 -1

1 Sequence

Length
1470

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C56A3.3d.1 C56A3.3d.1 1831   V: 13531666-13536105