WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56A3.6c.1 Sequence Name  C56A3.6c.1
Length (nt)  1367   Chromosome Location  V: 13553379-13556397
Chromosome . Primary Identifier  V Chromosome Location . Start  13553379
Chromosome Location . End  13556397 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56A3.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008345 micu-3 C56A3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56A3.6c C56A3.6c 1254   V: 13553479-13553998

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56A3.6c.1 13553379 13556397 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204734   620   V: 13553379-13553998 Caenorhabditis elegans
Exon204741   98   V: 13554424-13554521 Caenorhabditis elegans
Exon204746   57   V: 13554579-13554635 Caenorhabditis elegans
Exon204756   83   V: 13555703-13555785 Caenorhabditis elegans
Exon204762   318   V: 13555840-13556157 Caenorhabditis elegans
Exon204768   191   V: 13556207-13556397 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56A3.6c.1 13553379 13556397 -1

1 Sequence

Length
1367

1 Sequence Ontology Term

Identifier Name Description
transcript